2FAST2Q is ideal for CRISPRi-Seq, and for extracting and counting any kind of information from reads in the fastq format, such as barcodes in Bar-seq experiments. 2FAST2Q can work with sequence ...

A program using whole-genome sequencing data to localize T-DNA insertion site in plant genome and output the diagram of T-DNA insertion site, mosaic sequence reads, flanking sequences of T-DNA ...

RNA-seq has represented a pivotal breakthrough in transcriptomics. Among the successful factors of this technology, two features have had the highest impact: the capability of measuring the whole ...

Contributed by Howard Y. Chang; received November 19, 2024; accepted February 20, 2025; reviewed by Jellert Gaublomme and David A. Quigley The spatial organization of cells within tissues plays a ...